Detailed information of matrix profile MA0592.2

Profile summary

Name: Esrra
Matrix ID: MA0592.2
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 17488637
Uniprot ID: O08580  
Pazar TF: TF0000651
TFBSshape ID:
TFencyclopedia IDs: 357
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 110 131 33 4775 4775 1 0 6 0 4775 739 ]
C [ 696 339 4775 0 0 3 2 11 4775 6 350 ]
G [ 1482 57 404 4 4 4775 4775 52 211 293 55 ]
T [ 4775 4775 4 0 0 9 3 4775 42 2 3630 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.