Detailed information of matrix profile MA0597.1

Profile summary

Name: THAP1
Matrix ID: MA0597.1
Class: C2CH THAP-type zinc finger factors
Family: THAP-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 15863623
Uniprot ID: Q9NVV9  
Pazar TF:
TFBSshape ID: 371
TFencyclopedia IDs:
Source: ENCODE
Comment: The profile has been trimmed to keep the core DNA-binding of the TF since the right part of the motif is bound by something we do not know.

Sequence logo

Frequency matrix

A [ 18 15 20 7 3 58 47 30 116 ]
C [ 93 47 0 182 195 136 17 71 34 ]
G [ 27 12 137 0 0 1 77 41 17 ]
T [ 61 125 42 10 1 4 58 57 32 ]

Binding sites information

TFBS profiles