Detailed information of matrix profile MA0631.1

Profile summary

Name: Six3
Matrix ID: MA0631.1
Class: Homeo domain factors
Family: HD-SINE factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585360
Uniprot ID: Q62233  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 488
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0163.1 based on new evidence from Weirauch PBM (2014)

Sequence logo

Frequency matrix

A [ 33 72 23 47 7 2 16 0 97 0 1 92 19 25 40 34 8 ]
C [ 9 8 5 10 7 2 1 0 0 0 97 3 45 23 8 22 11 ]
G [ 36 8 17 32 82 90 83 4 3 0 0 3 9 20 11 18 24 ]
T [ 21 12 55 10 4 7 0 95 0 99 1 2 27 32 40 27 58 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles