Detailed information of matrix profile MA0646.1

Profile summary

Name: GCM1
Matrix ID: MA0646.1
Class: GCM domain factors
Family: GCM factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8962155
Uniprot ID: Q9NP62  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 655
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 2522 21439 161 4371 1002 594 0 0 146 21439 789 ]
C [ 8553 1811 154 274 21439 255 4 18 4992 2905 13412 ]
G [ 5154 4010 96 21439 572 21439 21439 21439 147 7971 4829 ]
T [ 5210 261 21439 15 880 3815 35 10 21439 2014 2409 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.