Detailed information of matrix profile MA0648.1

Profile summary

Name: GSC
Matrix ID: MA0648.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P56915  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 660
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 1249 955 0 6081 6081 0 416 315 836 1097 ]
C [ 1912 2885 54 71 0 25 6081 6081 2398 2197 ]
G [ 2039 553 0 176 0 144 452 828 1732 619 ]
T [ 882 1688 6081 89 0 6081 787 1099 1115 2168 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.