Detailed information of matrix profile MA0679.1

Profile summary

Name: ONECUT1
Matrix ID: MA0679.1
Class: Homeo domain factors
Family: HD-CUT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8887657
Uniprot ID: Q9UBC0  
Pazar TF: TF0000444
TFBSshape ID:
TFencyclopedia IDs: 503
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 2949 3971 7608 7608 7608 7608 0 0 2816 7608 2 7608 4480 1438 ]
C [ 1783 788 939 487 0 1 2 7608 0 0 3 132 2837 1965 ]
G [ 1677 1707 1523 130 365 3 6 0 4792 0 0 202 792 924 ]
T [ 1200 1143 1658 1871 2 1 7608 5 2 10 7608 622 3128 3281 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.