Detailed information of matrix profile MA0679.1

Profile summary

Name: ONECUT1
Matrix ID: MA0679.1
Class: Homeo domain factors
Family: HD-CUT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8887657
Uniprot ID: Q9UBC0  
Pazar TF: TF0000444
TFBSshape ID:
TFencyclopedia IDs: 503
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 3281 3128 622 7608 10 2 5 7608 1 2 1871 1658 1143 1200 ]
C [ 924 792 202 0 0 4792 0 6 3 365 130 1523 1707 1677 ]
G [ 1965 2837 132 3 0 0 7608 2 1 0 487 939 788 1783 ]
T [ 1438 4480 7608 2 7608 2816 0 0 7608 7608 7608 7608 3971 2949 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.