Detailed information of matrix profile MA0681.1

Profile summary

Name: Phox2b
Matrix ID: MA0681.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 22323723
Uniprot ID: Q99453  
Pazar TF: TF0000100
TFBSshape ID:
TFencyclopedia IDs: 802
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 3604 23359 23359 1784 955 3134 23359 23359 0 1514 23359 ]
C [ 1710 270 25 9263 10961 10392 1110 214 9 1130 202 ]
G [ 611 2656 63 905 5380 2149 4248 394 0 50 1102 ]
T [ 23359 1151 4 23359 12398 12967 604 102 23359 23359 2912 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.