Detailed information of matrix profile MA0684.1

  1. Home
  2. Matrix > MA0684.1

Profile summary
Name: RUNX3
Matrix ID: MA0684.1
Class: Runt domain factors
Family: Runt-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20483917
Uniprot ID: Q13761  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 3952 7636 7636 3 0 2991 30 7636 7636 4131 ]
C [ 1515 692 331 7636 7636 76 7636 368 1015 1198 ]
G [ 160 2431 273 0 22 4645 96 202 1772 861 ]
T [ 2008 438 0 0 0 41 52 184 964 1445 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0684.1 MA0684 1 RUNX3 Homo sapiens
Runt-related factors Runt domain factors
MA0684.2 MA0684 2 RUNX3 Homo sapiens
Runt-related factors Runt domain factors
MA0684.3 MA0684 3 RUNX3 Homo sapiens
Runt-related factors Runt domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0093.1

ChIP-seq Centrality
-log(P-value): 23517.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0093.1

ChIP-seq Centrality
-log(P-value): 23118.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: