Detailed information of matrix profile MA0685.1

Profile summary

Name: SP4
Matrix ID: MA0685.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23019068
Uniprot ID: Q02446  
Pazar TF: TF0000316
TFBSshape ID:
TFencyclopedia IDs: 843
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 621 2173 2600 939 260 2 3004 2 10 2 3 0 1840 113 1140 582 967 ]
C [ 1405 156 146 6 4443 4492 991 4662 14 4681 4732 4667 2430 4276 897 1206 1180 ]
G [ 823 65 1639 4774 0 5 3 0 5444 4 2 3 9 21 234 363 556 ]
T [ 1622 1809 199 16 4 135 0 0 55 0 0 72 67 1067 3043 2078 1509 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.