Detailed information of matrix profile MA0685.1

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Profile summary
Name: SP4
Matrix ID: MA0685.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23019068
Uniprot ID: Q02446  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 1509 2078 3043 1067 67 72 0 0 55 0 0 135 4 16 199 1809 1622 ]
C [ 556 363 234 21 9 3 2 4 5444 0 3 5 0 4774 1639 65 823 ]
G [ 1180 1206 897 4276 2430 4667 4732 4681 14 4662 991 4492 4443 6 146 156 1405 ]
T [ 967 582 1140 113 1840 0 3 2 10 2 3004 2 260 939 2600 2173 621 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0685.1 MA0685 1 SP4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0685.2 MA0685 2 SP4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0591.1

ChIP-seq Centrality
-log(P-value): 2140.85

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0591.1

ChIP-seq Centrality
-log(P-value): 2015.56

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: