Detailed information of matrix profile MA0687.1

Profile summary

Name: SPIC
Matrix ID: MA0687.1
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16887979
Uniprot ID: Q8N5J4  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 844
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 144 162 186 194 171 30 88 0 13 204 192 13 45 115 ]
C [ 83 31 25 9 0 75 59 8 0 7 31 0 24 36 ]
G [ 68 70 13 0 0 181 48 217 232 0 13 231 17 9 ]
T [ 72 40 18 4 75 13 0 3 26 16 8 0 194 19 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.