Detailed information of matrix profile MA0708.1

Profile summary

Name: MSX2
Matrix ID: MA0708.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P35548  
Pazar TF: TF0000296
TFBSshape ID:
TFencyclopedia IDs: 746
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 517 105 3400 3400 0 52 3400 1198 ]
C [ 1688 2592 161 28 0 169 61 791 ]
G [ 835 44 67 0 0 72 0 892 ]
T [ 360 807 84 0 3400 3400 21 518 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.