Detailed information of matrix profile MA0722.1

Profile summary

Name: VAX1
Matrix ID: MA0722.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: Q5SQQ9  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 447 679 5253 5253 297 508 5253 977 ]
C [ 2775 995 863 153 86 321 87 1911 ]
G [ 455 101 189 46 213 1951 1332 933 ]
T [ 2479 5253 302 133 5253 5253 398 1433 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links