Detailed information of matrix profile MA0722.1

Profile summary

Name: VAX1
Matrix ID: MA0722.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: Q5SQQ9  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 1433 398 5253 5253 133 302 5253 2479 ]
C [ 933 1332 1951 213 46 189 101 455 ]
G [ 1911 87 321 86 153 863 995 2775 ]
T [ 977 5253 508 297 5253 5253 679 447 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links