Detailed information of matrix profile MA0723.1

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Profile summary
Name: VAX2
Matrix ID: MA0723.1
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: Q9UIW0  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 921 1410 14297 14297 576 1341 14297 2711 ]
C [ 7816 2823 2781 213 161 987 179 5648 ]
G [ 1384 221 414 94 564 5673 3818 2869 ]
T [ 6482 14297 565 218 14297 14297 562 3069 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0723.1 MA0723 1 VAX2 Homo sapiens
NK Homeo domain factors
MA0723.2 MA0723 2 VAX2 Homo sapiens
NK Homeo domain factors
MA0723.3 MA0723 3 VAX2 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: