Detailed information of matrix profile MA0728.1

Profile summary

Name: Nr2f6(var.2)
Matrix ID: MA0728.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12690040
Uniprot ID: P43136  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 374
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 100 265 0 1 0 0 494 406 165 258 0 0 2 0 446 ]
C [ 16 0 0 0 0 667 30 4 0 0 0 0 0 678 0 ]
G [ 172 53 210 183 1 1 0 7 94 0 324 155 0 0 9 ]
T [ 0 3 0 0 378 51 1 9 59 0 0 5 369 3 0 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.