Detailed information of matrix profile MA0738.1

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Profile summary
Name: HIC2
Matrix ID: MA0738.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15231840
Uniprot ID: Q96JB3  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2606 0 494 23 435 1466 2493 770 760 ]
C [ 394 117 354 4891 4891 3425 710 2200 1732 ]
G [ 2285 0 4891 14 0 0 1290 1237 1001 ]
T [ 367 4891 151 0 59 0 399 684 1398 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0738.1 MA0738 1 HIC2 Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA0738.2 MA0738 2 HIC2 Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: