Detailed information of matrix profile MA0739.1

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Profile summary
Name: Hic1
Matrix ID: MA0739.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 15231840
Uniprot ID: Q9R1Y5  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2692 1488 614 317 68 0 183 11007 666 ]
C [ 1884 1629 2267 3 31 121 11007 73 4670 ]
G [ 4822 11007 1986 1999 11007 11007 588 422 719 ]
T [ 1610 1220 6140 9008 88 50 950 62 6337 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0739.1 MA0739 1 Hic1 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA0739.2 MA0739 2 Hic1 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: