Detailed information of matrix profile MA0787.1

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Profile summary
Name: POU3F2
Matrix ID: MA0787.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9852081
Uniprot ID: P20265  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 562 840 1292 13 45 604 372 60 1292 0 1292 700 ]
C [ 261 452 28 0 32 1 153 1292 12 25 40 171 ]
G [ 262 165 19 6 16 4 1292 9 30 16 65 61 ]
T [ 1292 137 63 1292 1292 688 68 19 28 1292 163 591 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0787.1 MA0787 1 POU3F2 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0563.1

ChIP-seq Centrality
-log(P-value): 1345.15

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0563.1

ChIP-seq Centrality
-log(P-value): 1359.28

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: