Detailed information of matrix profile MA0797.1

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Profile summary
Name: TGIF2
Matrix ID: MA0797.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8537382
Uniprot ID: Q9GZN2  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 420 113 11801 83 11801 91 2690 41 156 155 52 11801 ]
C [ 395 136 123 11801 57 4341 11801 270 51 396 11801 153 ]
G [ 172 11801 621 77 410 7459 262 25 11801 34 48 421 ]
T [ 11801 70 601 150 71 1501 324 11801 127 11801 97 477 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0797.1 MA0797 1 TGIF2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0790.1

ChIP-seq Centrality
-log(P-value): 871.561

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0790.1

ChIP-seq Centrality
-log(P-value): 873.979

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: