Detailed information of matrix profile MA0804.1

Profile summary

Name: TBX19
Matrix ID: MA0804.1
Class: T-Box factors
Family: Brachyury-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12093383
Uniprot ID: O60806  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 158
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 10247 7363 343 13892 23300 76 31154 2675 7973 5455 29962 5373 8127 82 278 2765 2535 31606 19937 16038 ]
C [ 5394 4213 1043 24809 456 31489 50 29630 15621 4319 1692 7005 1730 2983 20 12022 6135 111 4953 5961 ]
G [ 7955 7813 221 9198 12031 96 1899 1507 7432 2831 4295 19801 43953 265 48757 694 39866 858 4529 5924 ]
T [ 15259 21130 44289 2402 1889 228 27 5303 4383 40120 4116 8983 3921 43499 128 26200 13125 235 5442 8228 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.