Detailed information of matrix profile MA0830.2

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Profile summary
Name: TCF4
Matrix ID: MA0830.2
Class: Basic helix-loop-helix factors (bHLH)
Family: E2A
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 31081034
Uniprot ID: P15884  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 6048 7034 4168 243 27023 216 356 372 251 1694 5534 6413 5133 ]
C [ 10052 6754 5062 28686 635 26765 27724 1016 540 18935 12872 8658 9843 ]
G [ 7140 8618 18498 321 1295 1733 1197 679 28432 5281 4933 7964 7662 ]
T [ 6225 7059 1737 215 512 751 188 27398 242 3555 6126 6430 6827 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0830.1 MA0830 1 TCF4 Homo sapiens
E2A Basic helix-loop-helix factors (bHLH)
MA0830.2 MA0830 2 TCF4 Homo sapiens
E2A Basic helix-loop-helix factors (bHLH)
MA0830.3 MA0830 3 TCF4 Homo sapiens
E2A Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0601.2

ChIP-seq Centrality
-log(P-value): 13867.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0601.2

ChIP-seq Centrality
-log(P-value): 12992.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: