Detailed information of matrix profile MA0843.1

Profile summary

Name: TEF
Matrix ID: MA0843.1
Class: TEA domain factors
Family: TEF-1-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25215497
Uniprot ID: Q10587  
Pazar TF: TF0000573
TFBSshape ID:
TFencyclopedia IDs: 882
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 541 1971 90 107 3601 17 1324 0 3601 3601 0 1383 ]
C [ 1053 372 18 0 0 3601 0 133 76 0 2120 1141 ]
G [ 853 1630 5 31 108 0 2277 43 11 19 269 554 ]
T [ 1154 8 3601 3601 0 446 0 3601 161 10 1481 522 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.