Detailed information of matrix profile MA0843.1

Profile summary

Name: TEF
Matrix ID: MA0843.1
Class: TEA domain factors
Family: TEF-1-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25215497
Uniprot ID: Q10587  
Pazar TF: TF0000573
TFBSshape ID:
TFencyclopedia IDs: 882
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 522 1481 10 161 3601 0 446 0 3601 3601 8 1154 ]
C [ 554 269 19 11 43 2277 0 108 31 5 1630 853 ]
G [ 1141 2120 0 76 133 0 3601 0 0 18 372 1053 ]
T [ 1383 0 3601 3601 0 1324 17 3601 107 90 1971 541 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.