Detailed information of matrix profile MA0854.1

Profile summary

Name: Alx1
Matrix ID: MA0854.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: Q8C8B0  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 1004
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0010.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 19 7 38 43 5 1 98 98 1 0 92 53 15 23 39 24 15 ]
C [ 44 21 33 9 40 7 0 0 1 1 0 2 21 32 31 29 40 ]
G [ 17 65 14 31 2 0 1 1 0 0 7 40 11 16 12 23 14 ]
T [ 20 7 15 17 53 92 0 1 98 98 1 5 53 29 17 24 31 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles