Detailed information of matrix profile MA0856.1

Profile summary

Name: RXRG
Matrix ID: MA0856.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15019979
Uniprot ID: P48443  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 345
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 7824 14207 49 102 5 28 37922 34468 33003 9 12 2 78 36677 ]
C [ 3800 63 4 9 35 56980 0 14 0 1 1 17 49963 43 ]
G [ 21426 20865 23554 22312 126 734 76 970 1634 29532 27903 134 935 2323 ]
T [ 1886 20 77 3946 39123 3942 4 574 5 20 3913 37558 2999 27 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.