Detailed information of matrix profile MA0868.1

Profile summary

Name: SOX8
Matrix ID: MA0868.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12920151
Uniprot ID: P57073  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 460 460 1 460 460 0 162 1 30 0 460 1 0 0 1 0 ]
C [ 0 0 460 0 1 0 7 0 41 460 0 0 0 0 0 4 ]
G [ 0 0 0 2 1 1 298 0 371 2 0 460 1 460 0 0 ]
T [ 7 0 0 0 1 460 37 460 89 2 0 2 460 0 460 460 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

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