Detailed information of matrix profile MA0872.1

Profile summary

Name: TFAP2A(var.3)
Matrix ID: MA0872.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: P05549  
Pazar TF: TF0000002
TFBSshape ID:
TFencyclopedia IDs:
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 262 0 0 0 48 55 188 556 192 0 0 0 721 ]
C [ 154 357 1368 1373 1115 524 506 224 66 0 0 1099 102 ]
G [ 134 1359 0 0 95 212 546 538 1420 1911 1903 366 198 ]
T [ 837 0 0 0 131 650 251 75 53 0 0 0 260 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.