Detailed information of matrix profile MA0894.1

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Profile summary
Name: HESX1
Matrix ID: MA0894.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 11748154
Uniprot ID: Q9UBX0  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1209 373 97 4072 4072 0 31 4072 1313 744 ]
C [ 461 1681 2180 0 15 9 53 34 447 1743 ]
G [ 1601 772 38 15 0 7 0 0 1432 753 ]
T [ 801 1245 1892 0 0 4072 4072 187 879 831 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0894.1 MA0894 1 HESX1 Homo sapiens
Paired-related HD factors Homeo domain factors
MA0894.2 MA0894 2 HESX1 Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: