Detailed information of matrix profile MA0896.1

Profile summary

Name: Hmx1
Matrix ID: MA0896.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: O70218  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0041.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 34 17 36 69 13 1 87 88 0 2 95 88 25 14 38 33 18 ]
C [ 29 43 29 6 8 95 0 11 0 6 0 1 15 22 29 13 20 ]
G [ 24 27 26 16 72 0 12 0 0 0 1 4 17 50 28 24 22 ]
T [ 13 13 9 9 7 4 1 1 99 93 3 6 43 13 4 31 40 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles