Detailed information of matrix profile MA0897.1

Profile summary

Name: Hmx2
Matrix ID: MA0897.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P43687  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 675
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0042.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 50 19 55 77 17 1 85 85 1 2 93 89 36 25 41 47 9 ]
C [ 20 44 19 6 15 97 0 13 0 6 0 1 19 21 27 10 7 ]
G [ 23 23 17 12 57 0 15 1 0 0 1 2 11 41 27 25 9 ]
T [ 7 14 9 6 11 1 0 1 99 93 5 8 34 14 5 18 74 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles