Detailed information of matrix profile MA0904.1

Profile summary

Name: Hoxb5
Matrix ID: MA0904.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P09079  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 688
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0060.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 52 27 17 12 1 90 98 1 0 92 19 10 28 28 68 22 ]
C [ 23 35 9 15 7 9 1 0 0 0 29 65 25 44 5 16 ]
G [ 14 19 65 38 0 0 0 1 9 7 41 9 10 11 14 14 ]
T [ 11 19 10 35 92 0 1 98 90 1 11 17 36 17 14 48 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles