Detailed information of matrix profile MA0904.1

Profile summary

Name: Hoxb5
Matrix ID: MA0904.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P09079  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 688
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0060.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 48 14 17 36 17 11 1 90 98 1 0 92 35 10 19 11 ]
C [ 14 14 11 10 9 41 7 9 1 0 0 0 38 65 19 14 ]
G [ 16 5 44 25 65 29 0 0 0 1 9 7 15 9 35 23 ]
T [ 22 68 28 28 10 19 92 0 1 98 90 1 12 17 27 52 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles