Detailed information of matrix profile MA0910.1

Profile summary

Name: Hoxd8
Matrix ID: MA0910.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P23463  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 699
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0080.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 13 60 60 33 7 72 92 4 5 95 79 7 35 24 19 19 36 ]
C [ 12 12 8 5 23 12 2 1 1 0 5 9 4 7 50 9 21 ]
G [ 20 11 20 29 1 3 2 1 0 1 2 5 47 56 8 14 18 ]
T [ 55 16 11 33 69 12 4 94 94 3 13 79 14 13 24 59 25 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles