Detailed information of matrix profile MA0912.1

Profile summary

Name: Hoxd3
Matrix ID: MA0912.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P09027  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 697
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0079.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 19 19 14 37 24 14 1 87 98 1 0 84 37 24 12 9 ]
C [ 37 8 10 10 9 24 14 12 1 0 0 0 37 44 37 22 ]
G [ 5 8 60 33 44 29 0 0 0 1 12 14 14 9 31 21 ]
T [ 39 65 16 21 24 33 84 0 1 98 87 1 11 24 21 48 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles