Detailed information of matrix profile MA0995.2

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Profile summary
Name: ERF039
Matrix ID: MA0995.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9SUK8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 462 380 30 13 81 7 18 1 78 316 530 ]
C [ 278 236 72 15 45 1605 10 23 864 168 258 ]
G [ 420 533 21 1615 137 13 1605 1617 23 875 574 ]
T [ 484 495 1521 1 1381 19 11 3 679 285 282 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0995.1 MA0995 1 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0995.2 MA0995 2 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0995.3 MA0995 3 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0477.2

ChIP-seq Centrality
-log(P-value): 833.412

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0477.2

ChIP-seq Centrality
-log(P-value): 897.187

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: