Detailed information of matrix profile MA1031.1

Profile summary

Name: OJ1581_H09.2
Matrix ID: MA1031.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Oryza sativa Japonica Group
Data Type: PBM
Validation: 21241251
Uniprot ID: Q6H878  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

A [ 175 74 0 0 127 112 0 71 445 279 ]
C [ 131 146 0 0 101 661 1000 929 335 414 ]
G [ 414 335 929 1000 661 101 0 0 146 131 ]
T [ 279 445 71 0 112 127 0 0 74 175 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links