Detailed information of matrix profile MA1043.1

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Profile summary
Name: NAC083
Matrix ID: MA1043.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q9FY93  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 225 226 0 0 402 0 0 0 623 325 ]
C [ 225 126 0 0 0 1000 0 0 25 124 ]
G [ 325 522 0 0 598 0 1000 0 327 124 ]
T [ 225 126 1000 1000 0 0 0 1000 25 427 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1043.1 MA1043 1 NAC083 Arabidopsis thaliana
NAC GCM domain factors
MA1043.2 MA1043 2 NAC083 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0224.1

ChIP-seq Centrality
-log(P-value): 14034.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0224.1

ChIP-seq Centrality
-log(P-value): 13865.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: