Detailed information of matrix profile MA1047.1

Profile summary

Name: TGA5
Matrix ID: MA1047.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 8487298
Uniprot ID: Q39163  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

A [ 444 0 0 984 0 16 0 353 ]
C [ 244 0 0 0 1000 0 98 294 ]
G [ 289 0 906 16 0 984 0 206 ]
T [ 22 1000 94 0 0 0 901 147 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.

External links