Detailed information of matrix profile MA1050.1

Profile summary

Name: OsI_08196
Matrix ID: MA1050.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Oryza sativa Indica Group
Data Type: PBM
Validation: 21241251
Uniprot ID: A2X7K8  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

A [ 1 46 91 0 0 0 899 1 ]
C [ 1 0 91 863 999 999 50 855 ]
G [ 946 953 726 46 0 0 50 72 ]
T [ 53 0 91 91 0 0 0 72 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links