Detailed information of matrix profile MA1054.1

Profile summary

Name: ARALYDRAFT_897773
Matrix ID: MA1054.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis lyrata subsp. lyrata
Data Type: PBM
Validation: 21241251
Uniprot ID: D7L3Y2  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

A [ 92 27 36 17 40 756 2 1 862 20 ]
C [ 278 79 4 7 125 215 949 995 2 907 ]
G [ 167 491 877 957 826 7 47 2 132 6 ]
T [ 463 402 83 19 9 22 2 1 4 67 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links