Detailed information of matrix profile MA1058.1

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Profile summary
Name: SPL4
Matrix ID: MA1058.1
Class: C2H2 zinc finger factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9S7A9  
Source: 25215497
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 277 290 218 140 57 3 847 102 242 ]
C [ 195 205 414 557 5 11 26 636 198 ]
G [ 258 252 104 106 893 51 83 54 327 ]
T [ 269 252 264 197 44 934 44 208 233 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1058.1 MA1058 1 SPL4 Arabidopsis thaliana
SBP C2H2 zinc finger factors
MA1058.2 MA1058 2 SPL4 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: