Detailed information of matrix profile MA1083.1

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Profile summary
Name: WRKY30
Matrix ID: MA1083.1
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11449049
Uniprot ID: Q9FL62  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 313 203 162 110 42 27 0 996 3 37 ]
C [ 251 265 481 44 78 14 0 1 989 437 ]
G [ 221 327 227 783 20 55 976 2 6 132 ]
T [ 214 205 130 62 861 903 23 1 1 395 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1083.1 MA1083 1 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
MA1083.2 MA1083 2 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
MA1083.3 MA1083 3 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0618.1

ChIP-seq Centrality
-log(P-value): 3964.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0618.1

ChIP-seq Centrality
-log(P-value): 3968.72

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: