Detailed information of matrix profile MA1099.2

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Profile summary
Name: HES1
Matrix ID: MA1099.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15870295
Uniprot ID: Q14469  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 3321 5858 464 9446 0 21 253 1 1126 2742 ]
C [ 3492 2072 18526 0 18526 0 4057 0 6203 12513 ]
G [ 18526 18526 0 9081 0 18526 0 18526 6360 6013 ]
T [ 4239 8007 18 232 791 0 18526 53 4837 3216 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1099.1 MA1099 1 Hes1 Mus musculus
Hairy-related factors Basic helix-loop-helix factors (bHLH)
MA1099.2 MA1099 2 HES1 Homo sapiens
Hairy-related factors Basic helix-loop-helix factors (bHLH)
MA1099.3 MA1099 3 HES1 Homo sapiens
Hairy-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0826.1

ChIP-seq Centrality
-log(P-value): 437.588

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0826.1

ChIP-seq Centrality
-log(P-value): 427.517

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: