Detailed information of matrix profile MA1112.1

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Profile summary
Name: NR4A1
Matrix ID: MA1112.1
Class: Nuclear receptors with C4 zinc fingers
Family: NGFI-B-related receptors (NR4)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12082103
Uniprot ID: P22736  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 2015 705 17 8315 16 161 56 92 1015 2386 ]
C [ 2012 861 0 21 8314 8009 15 72 1245 1789 ]
G [ 2335 418 8319 28 17 189 163 12 440 1742 ]
T [ 2019 6397 45 17 34 22 8147 8205 5681 2464 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1112.1 MA1112 1 NR4A1 Homo sapiens
NGFI-B-related receptors (NR4) Nuclear receptors with C4 zinc fingers
MA1112.2 MA1112 2 NR4A1 Homo sapiens
NGFI-B-related receptors (NR4) Nuclear receptors with C4 zinc fingers
MA1112.3 MA1112 3 NR4A1 Homo sapiens
NGFI-B-related receptors (NR4) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 1782.87

TFFM details

TFFM ID: TFFM0145.1

ChIP-seq Centrality
-log(P-value): 3633.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0145.1

ChIP-seq Centrality
-log(P-value): 3597.0

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: