Detailed information of matrix profile MA1112.2

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Profile summary
Name: NR4A1
Matrix ID: MA1112.2
Class: Nuclear receptors with C4 zinc fingers
Family: NGFI-B-related receptors (NR4)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12082103
Uniprot ID: P22736  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3431 3409 321 757 13380 497 2974 53 209 555 4521 5001 ]
C [ 3887 4075 329 151 1358 14964 12434 128 333 823 3380 4159 ]
G [ 3370 3987 151 14949 824 166 92 62 117 236 3563 3283 ]
T [ 5239 4456 15126 70 365 300 427 15684 15268 14313 4463 3484 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1112.1 MA1112 1 NR4A1 Homo sapiens
NGFI-B-related receptors (NR4) Nuclear receptors with C4 zinc fingers
MA1112.2 MA1112 2 NR4A1 Homo sapiens
NGFI-B-related receptors (NR4) Nuclear receptors with C4 zinc fingers
MA1112.3 MA1112 3 NR4A1 Homo sapiens
NGFI-B-related receptors (NR4) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0145.2

ChIP-seq Centrality
-log(P-value): 3172.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0145.2

ChIP-seq Centrality
-log(P-value): 3096.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: