Detailed information of matrix profile MA1123.2

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Profile summary
Name: TWIST1
Matrix ID: MA1123.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 29453333
Uniprot ID: Q15672  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 8329 7822 7536 3733 377 26713 440 24524 357 380 1801 4070 6823 ]
C [ 5761 5530 4597 20412 26665 136 1320 1687 456 396 2919 7402 6561 ]
G [ 6485 5722 5772 2336 117 210 24166 908 288 25975 4069 7273 6213 ]
T [ 6758 8259 9428 852 174 274 1407 214 26232 582 18544 8588 7736 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1123.1 MA1123 1 TWIST1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1123.2 MA1123 2 TWIST1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1123.3 MA1123 3 TWIST1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0155.2

ChIP-seq Centrality
-log(P-value): 19404.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0155.2

ChIP-seq Centrality
-log(P-value): 19306.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: