Detailed information of matrix profile MA1152.1

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Profile summary
Name: SOX15
Matrix ID: MA1152.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 15863505
Uniprot ID: O60248  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 407 418 506 971 5 994 988 362 501 267 ]
C [ 165 114 125 3 890 2 6 5 26 147 ]
G [ 188 253 188 2 21 2 3 3 412 554 ]
T [ 241 215 180 24 83 3 3 631 62 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1152.1 MA1152 1 SOX15 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
MA1152.2 MA1152 2 SOX15 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: