Detailed information of matrix profile MA1154.1

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Profile summary
Name: ZNF282
Matrix ID: MA1154.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 28092692
Uniprot ID: Q9UDV7  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 21 39 16 3 0 0 0 140 12 256 277 2 242 1 14 157 44 ]
C [ 196 21 0 2 209 208 205 99 132 3 0 210 44 210 0 40 98 ]
G [ 50 7 8 3 2 0 3 0 2 37 0 4 2 2 297 60 97 ]
T [ 45 378 387 380 0 1 2 21 126 61 2 3 7 2 129 43 51 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1154.1 MA1154 1 ZNF282 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1154.2 MA1154 2 ZNF282 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0638.1

ChIP-seq Centrality
-log(P-value): 511.469

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0638.1

ChIP-seq Centrality
-log(P-value): 419.595

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: